Computational Biology Development
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Recombination Analysis Tool (RAT) v.1.0
Distance-based analysis made easy. The Recombination Analysis Tool (RAT) is an uncomplicated and intuitive cross-platform Java-based software intended for high-throughput, distance-based analysis of both DNA and protein multiple sequence alignments,
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MetaQuant v.1.3.5
GC/MS based metabolome data analysis made easy. MetaQuant is a Java based software for the automatic and accurate quantification of GC/MS based metabolome data.
FASTA BLAST Scan v.2.1
FASTA BLAST Scan is a software for processing nucleotide sequences alignment made with FASTA and BLAST alignment tools. Nucleotide sequences alignment analysis made easy.FASTA BLAST Scan's features Input 1. FASTA BLAST Scan can process two types of
Patristic v.1.0
Patristic is a Java software that uses as input different tree files and computes their patristic distances. Patristic allows saving and editing in different ways those distances.
DyNet v.1.1
Dynamic network visualization made easy. dyNet is a Java program for dynamic network visualization, manipulation and clustering. Results can be exported in a variety of formats.dyNet Features: 1. dynamic network visualization 2. network manipulation
EDIBLE v.1.0
Make phylogenetic information calculations fast and easy. EDIBLE (Experimental Design and Information By Likelihood Exploration) help you make phylogenetic information calculations.
PeakAnnotator v.1.3
PeakAnnotator is a Java GUI software for annotating genomic loci.Usage: java -jar peakAnnotator.jar -u utility press -u in order to get help about the options that are specific for each utilityOptions include: -help,-? displays help
GenemiR v.1.0
GenemiR is a software aimed at biologists and bioinformaticians who wish to find prediction and expression patterns in sets of microRNAs and genes. The software works with mouse and human target prediction and expression data.
PeakAnalyzer v.1.3
PeakAnalyzer is a Java GUI software for annotating and subdividing broad peaks into individual binding sites. Comprising two main utilities: 1. PeakAnnotator - for annotating genomic loci 2. PeaksSplitter - for subdividing broad peaks into individual
PeakSplitter v.1.0
PeakSplitter is a Java GUI software for that will help you subdivide broad peaks, subdividing broad peaks into individual binding sites.Usage: java -jar splitPeaks.jar Options include: -help,-? displays help information -p,--peakFile
SLR (Sitewise Likehood Ratio) v.1.0
Small DNA analysis tool. SLR (Sitewise Likehood Ratio estimation of selection) is a software to detect sites in coding DNA that are unusually conserved and/or unusually variable (that is,